Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cd109Q8R422 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cd109Q8R422 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cd109Q8R422 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC15.92■□□□□ 0.14
Cd109Q8R422 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC15.92■□□□□ 0.14
Cd109Q8R422 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cd109Q8R422 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cd109Q8R422 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC15.92■□□□□ 0.14
Cd109Q8R422 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cd109Q8R422 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC15.92■□□□□ 0.14
Cd109Q8R422 Gm3318-201ENSMUST00000217604 1183 ntBASIC15.92■□□□□ 0.14
Cd109Q8R422 AC137871.1-201ENSMUST00000228278 475 ntBASIC15.92■□□□□ 0.14
Cd109Q8R422 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd109Q8R422 AC022682.1-201ENSMUST00000224624 2023 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cd109Q8R422 Gm42498-201ENSMUST00000199981 1372 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cd109Q8R422 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 n-R5s130-201ENSMUST00000178128 119 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 Gm24312-201ENSMUST00000178677 119 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 n-R5s106-201ENSMUST00000179060 119 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 n-R5s118-201ENSMUST00000179887 119 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Gm7939-201ENSMUST00000201233 1050 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 BC080696-201ENSMUST00000202858 1218 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC15.91■□□□□ 0.14
Cd109Q8R422 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC15.91■□□□□ 0.14
Cd109Q8R422 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 CT030652.1-201ENSMUST00000227377 1235 ntBASIC15.91■□□□□ 0.14
Cd109Q8R422 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Cd109Q8R422 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd109Q8R422 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.9■□□□□ 0.14
Cd109Q8R422 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm44663-201ENSMUST00000206898 3150 ntBASIC15.9■□□□□ 0.14
Cd109Q8R422 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 AC167565.1-201ENSMUST00000226980 1833 ntBASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC15.9■□□□□ 0.14
Cd109Q8R422 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm12463-201ENSMUST00000118271 849 ntBASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm16459-201ENSMUST00000121443 686 ntBASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm44498-201ENSMUST00000199509 111 ntBASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC15.9■□□□□ 0.14
Cd109Q8R422 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd109Q8R422 Gm19680-201ENSMUST00000095050 1513 ntBASIC15.9■□□□□ 0.14
Cd109Q8R422 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms