Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Gm29127-201ENSMUST00000188304 517 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Gm8956-201ENSMUST00000203939 825 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Snora73a-201ENSMUST00000082453 205 ntBASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ebf4Q8K4J2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm16379-201ENSMUST00000161469 348 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm20495-201ENSMUST00000173902 235 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm8762-201ENSMUST00000193486 339 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm43818-201ENSMUST00000200605 466 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm6450-201ENSMUST00000200896 574 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm44008-201ENSMUST00000204345 412 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Ebf4Q8K4J2 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Gm23061-201ENSMUST00000102348 116 ntBASIC10.24□□□□□ -0.77
Ebf4Q8K4J2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms