Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim50Q810I2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim50Q810I2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm12419-201ENSMUST00000116649 636 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm11956-201ENSMUST00000119525 512 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm20426-201ENSMUST00000173657 440 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm7741-201ENSMUST00000181445 989 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim50Q810I2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm45856-201ENSMUST00000212752 416 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.03□□□□□ -0.64
Trim50Q810I2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim50Q810I2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim50Q810I2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.02□□□□□ -0.64
Trim50Q810I2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim50Q810I2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trim50Q810I2 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trim50Q810I2 Gm15432-201ENSMUST00000121106 195 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 Gm9089-201ENSMUST00000122027 526 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 Olfml3-204ENSMUST00000169286 874 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 Mir6546-201ENSMUST00000184460 62 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Gm43852-201ENSMUST00000202098 917 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim50Q810I2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim50Q810I2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.02□□□□□ -0.65
Trim50Q810I2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim50Q810I2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim50Q810I2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim50Q810I2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms