Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm28388-201ENSMUST00000186262 437 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm42816-201ENSMUST00000198433 325 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm10752-201ENSMUST00000218348 729 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm6407-201ENSMUST00000176468 549 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm44158-201ENSMUST00000203881 505 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm18561-201ENSMUST00000206027 804 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm10263-201ENSMUST00000085163 300 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdh19Q80TF3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms