Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm14892-201ENSMUST00000117636 267 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm11500-201ENSMUST00000118237 601 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm13422-201ENSMUST00000118834 504 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm17825-201ENSMUST00000206836 794 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm19091-201ENSMUST00000208120 978 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh8Q7TSK3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm14071-201ENSMUST00000117817 509 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm11675-201ENSMUST00000121873 832 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm26134-201ENSMUST00000178484 110 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm29410-201ENSMUST00000188383 694 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm37284-201ENSMUST00000193607 539 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm5298-201ENSMUST00000201122 892 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm18561-201ENSMUST00000206027 804 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh8Q7TSK3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms