Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rnf220Q6PDX6 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rnf220Q6PDX6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rnf220Q6PDX6 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms