Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Gm9947-201ENSMUST00000067599 2920 ntBASIC8.63□□□□□ -1.03
NipblQ6KCD5 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Gm9415-201ENSMUST00000200462 1321 ntBASIC8.63□□□□□ -1.03
NipblQ6KCD5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NipblQ6KCD5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm43102-201ENSMUST00000201004 2324 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm14398-201ENSMUST00000117287 1073 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 AC154305.2-201ENSMUST00000225813 901 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm13608-201ENSMUST00000121807 1406 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm8111-201ENSMUST00000117659 987 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm5529-201ENSMUST00000165691 891 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm7572-201ENSMUST00000182616 766 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Mir7035-201ENSMUST00000184713 82 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm8873-201ENSMUST00000217847 1439 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NipblQ6KCD5 Nudt18-202ENSMUST00000228554 3619 ntBASIC8.62□□□□□ -1.03
NipblQ6KCD5 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm9369-201ENSMUST00000196009 733 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms