Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn9aQ62205 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn9aQ62205 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Gm13505-201ENSMUST00000121666 817 ntBASIC13.1□□□□□ -0.31
Scn9aQ62205 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn9aQ62205 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn9aQ62205 Gm8525-201ENSMUST00000189674 861 ntBASIC13.1□□□□□ -0.31
Scn9aQ62205 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.1□□□□□ -0.31
Scn9aQ62205 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Gm25514-201ENSMUST00000083860 135 ntBASIC13.1□□□□□ -0.31
Scn9aQ62205 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Scn9aQ62205 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.1□□□□□ -0.31
Scn9aQ62205 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn9aQ62205 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn9aQ62205 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm7242-201ENSMUST00000221134 705 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm25591-201ENSMUST00000177317 94 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm20091-201ENSMUST00000179683 189 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm26943-201ENSMUST00000182295 957 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm44917-201ENSMUST00000208798 520 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm8170-201ENSMUST00000218581 945 ntBASIC13.09□□□□□ -0.31
Scn9aQ62205 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Scn9aQ62205 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn9aQ62205 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.08□□□□□ -0.31
Scn9aQ62205 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.08□□□□□ -0.32
Scn9aQ62205 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scn9aQ62205 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn9aQ62205 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms