Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm7416-201ENSMUST00000117448 1487 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm11868-201ENSMUST00000121594 1478 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 AC126444.1-201ENSMUST00000225938 1768 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 AC126262.1-201ENSMUST00000221802 1904 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm12015-201ENSMUST00000117065 843 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm14021-201ENSMUST00000117683 961 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm2058-201ENSMUST00000178791 560 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Mir6979-201ENSMUST00000183927 56 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm9230-201ENSMUST00000188228 532 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm37700-201ENSMUST00000192617 965 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm18422-201ENSMUST00000203663 1032 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm44262-201ENSMUST00000204969 372 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm45240-201ENSMUST00000211437 674 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 AC127302.1-201ENSMUST00000215973 1111 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC8.76□□□□□ -1.01
Foxc1Q61572 AC160109.1-201ENSMUST00000225592 729 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 AC123665.1-201ENSMUST00000228204 438 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.76□□□□□ -1.01
Foxc1Q61572 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Foxc1Q61572 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Foxc1Q61572 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms