Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.85□□□□□ -0.67
Col12a1Q60847 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col12a1Q60847 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col12a1Q60847 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm37944-201ENSMUST00000194233 414 ntBASIC10.85□□□□□ -0.67
Col12a1Q60847 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC10.85□□□□□ -0.67
Col12a1Q60847 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
Col12a1Q60847 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col12a1Q60847 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm11929-201ENSMUST00000118175 945 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm2492-201ENSMUST00000221355 1394 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm15031-201ENSMUST00000121341 210 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.84□□□□□ -0.67
Col12a1Q60847 AC166061.1-201ENSMUST00000225163 1138 ntBASIC10.84□□□□□ -0.67
Col12a1Q60847 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Col12a1Q60847 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col12a1Q60847 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Col12a1Q60847 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm22751-201ENSMUST00000102077 109 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm13543-201ENSMUST00000121230 796 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Pea15b-202ENSMUST00000183185 555 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm9353-201ENSMUST00000200472 604 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm3198-201ENSMUST00000208725 1026 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.83□□□□□ -0.68
Col12a1Q60847 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm27383-201ENSMUST00000184418 361 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.83□□□□□ -0.68
Col12a1Q60847 AL844586.1-201ENSMUST00000224297 1042 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms