Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Gm29787-201ENSMUST00000222129 849 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm10179-201ENSMUST00000086233 688 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.89□□□□□ -0.67
ClpbQ60649 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.89□□□□□ -0.67
ClpbQ60649 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
ClpbQ60649 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClpbQ60649 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClpbQ60649 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.88□□□□□ -0.67
ClpbQ60649 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.88□□□□□ -0.67
ClpbQ60649 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ClpbQ60649 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.88□□□□□ -0.67
ClpbQ60649 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.88□□□□□ -0.67
ClpbQ60649 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
ClpbQ60649 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm23045-201ENSMUST00000175041 96 ntBASIC10.88□□□□□ -0.67
ClpbQ60649 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.88□□□□□ -0.67
ClpbQ60649 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.88□□□□□ -0.67
ClpbQ60649 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.88□□□□□ -0.67
ClpbQ60649 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ClpbQ60649 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.88□□□□□ -0.67
ClpbQ60649 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ClpbQ60649 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ClpbQ60649 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ClpbQ60649 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ClpbQ60649 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.88□□□□□ -0.67
ClpbQ60649 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.88□□□□□ -0.67
ClpbQ60649 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ClpbQ60649 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.87□□□□□ -0.67
ClpbQ60649 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.87□□□□□ -0.67
ClpbQ60649 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ClpbQ60649 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms