Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm26047-201ENSMUST00000157308 113 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm26047-202ENSMUST00000198840 115 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm4157-201ENSMUST00000211647 679 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trim43aQ3TL54 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm13996-201ENSMUST00000118456 430 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm8856-201ENSMUST00000185254 1144 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm43068-201ENSMUST00000201095 1273 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm45186-201ENSMUST00000206874 478 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm19208-201ENSMUST00000213861 912 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 AC113082.1-201ENSMUST00000217324 327 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 AC159205.5-202ENSMUST00000224849 386 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm33366-201ENSMUST00000195583 3827 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 Gm43482-201ENSMUST00000202797 1861 ntBASIC12□□□□□ -0.49
Trim43aQ3TL54 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim43aQ3TL54 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.99□□□□□ -0.49
Trim43aQ3TL54 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms