Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Gm44315-201ENSMUST00000203041 219 ntBASIC9.95□□□□□ -0.82
Thbs3Q05895 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.95□□□□□ -0.82
Thbs3Q05895 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.95□□□□□ -0.82
Thbs3Q05895 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.95□□□□□ -0.82
Thbs3Q05895 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.95□□□□□ -0.82
Thbs3Q05895 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thbs3Q05895 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm23272-201ENSMUST00000104053 129 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm11949-201ENSMUST00000117640 372 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm8302-201ENSMUST00000119217 852 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm15881-201ENSMUST00000148792 942 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Mir5132-201ENSMUST00000175166 71 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm23694-201ENSMUST00000179335 110 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Mir6546-201ENSMUST00000184460 62 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Gm6439-201ENSMUST00000199849 862 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.94□□□□□ -0.82
Thbs3Q05895 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.94□□□□□ -0.82
Thbs3Q05895 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thbs3Q05895 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Thbs3Q05895 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Thbs3Q05895 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.93□□□□□ -0.82
Thbs3Q05895 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Thbs3Q05895 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Thbs3Q05895 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms