Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lig3P97386 Gm11511-201ENSMUST00000118146 540 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Gm21092-201ENSMUST00000178995 955 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.45□□□□□ -0.42
Lig3P97386 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Gm44158-201ENSMUST00000203881 505 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.45□□□□□ -0.42
Lig3P97386 Mt1-202ENSMUST00000211807 1085 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Gm3619-201ENSMUST00000219947 775 ntBASIC12.45□□□□□ -0.42
Lig3P97386 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.45□□□□□ -0.42
Lig3P97386 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lig3P97386 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lig3P97386 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lig3P97386 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Gm13549-201ENSMUST00000118339 796 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Gm12990-201ENSMUST00000120372 468 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Gm13022-201ENSMUST00000121181 285 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.44□□□□□ -0.42
Lig3P97386 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.44□□□□□ -0.42
Lig3P97386 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.44□□□□□ -0.42
Lig3P97386 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Gm4654-201ENSMUST00000183305 982 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Gm18463-201ENSMUST00000207258 474 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Gm45575-201ENSMUST00000210283 548 ntBASIC12.44□□□□□ -0.42
Lig3P97386 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.44□□□□□ -0.42
Lig3P97386 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.44□□□□□ -0.42
Lig3P97386 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.44□□□□□ -0.42
Lig3P97386 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lig3P97386 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.44□□□□□ -0.42
Lig3P97386 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lig3P97386 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.43□□□□□ -0.42
Lig3P97386 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lig3P97386 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Lig3P97386 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lig3P97386 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.43□□□□□ -0.42
Lig3P97386 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Gm22920-201ENSMUST00000102175 109 ntBASIC12.43□□□□□ -0.42
Lig3P97386 Gm5257-201ENSMUST00000121823 790 ntBASIC12.43□□□□□ -0.42
Lig3P97386 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Lig3P97386 Gm23119-201ENSMUST00000158610 140 ntBASIC12.43□□□□□ -0.42
Lig3P97386 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lig3P97386 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.43□□□□□ -0.42
Lig3P97386 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 211.2 ms