Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Smad1P70340 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Gm23153-201ENSMUST00000175323 313 ntBASIC11.68□□□□□ -0.54
Smad1P70340 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Gm38117-201ENSMUST00000194653 939 ntBASIC11.68□□□□□ -0.54
Smad1P70340 Gm37905-201ENSMUST00000195310 341 ntBASIC11.68□□□□□ -0.54
Smad1P70340 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.68□□□□□ -0.54
Smad1P70340 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.68□□□□□ -0.54
Smad1P70340 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Gm26448-201ENSMUST00000082446 203 ntBASIC11.68□□□□□ -0.54
Smad1P70340 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.68□□□□□ -0.54
Smad1P70340 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.68□□□□□ -0.54
Smad1P70340 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Smad1P70340 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smad1P70340 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.67□□□□□ -0.54
Smad1P70340 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.67□□□□□ -0.54
Smad1P70340 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smad1P70340 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.67□□□□□ -0.54
Smad1P70340 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Smad1P70340 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Gm28324-201ENSMUST00000187913 264 ntBASIC11.67□□□□□ -0.54
Smad1P70340 Gm38314-201ENSMUST00000195709 625 ntBASIC11.67□□□□□ -0.54
Smad1P70340 Gm43184-201ENSMUST00000197247 542 ntBASIC11.67□□□□□ -0.54
Smad1P70340 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Smad1P70340 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.67□□□□□ -0.54
Smad1P70340 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.67□□□□□ -0.54
Smad1P70340 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.67□□□□□ -0.54
Smad1P70340 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Smad1P70340 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smad1P70340 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.67□□□□□ -0.54
Smad1P70340 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.66□□□□□ -0.54
Smad1P70340 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smad1P70340 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smad1P70340 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Smad1P70340 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms