Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm43138-201ENSMUST00000199123 708 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Gm44136-201ENSMUST00000203819 1106 ntBASIC10□□□□□ -0.81
Sec61a1P61620 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Gm5455-201ENSMUST00000058710 715 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Sec61a1P61620 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Gm9796-201ENSMUST00000062249 2250 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10□□□□□ -0.81
Sec61a1P61620 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10□□□□□ -0.81
Sec61a1P61620 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10□□□□□ -0.81
Sec61a1P61620 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Sec61a1P61620 Gm37131-201ENSMUST00000192502 1561 ntBASIC10□□□□□ -0.81
Sec61a1P61620 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sec61a1P61620 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sec61a1P61620 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm22133-201ENSMUST00000102082 109 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm14247-201ENSMUST00000120950 237 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm12566-201ENSMUST00000121479 359 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm17040-202ENSMUST00000170597 889 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Sec61a1P61620 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.99□□□□□ -0.81
Sec61a1P61620 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm17827-201ENSMUST00000211825 742 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.99□□□□□ -0.81
Sec61a1P61620 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.99□□□□□ -0.81
Sec61a1P61620 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Sec61a1P61620 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sec61a1P61620 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sec61a1P61620 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.98□□□□□ -0.81
Sec61a1P61620 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.98□□□□□ -0.81
Sec61a1P61620 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms