Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Gm20091-201ENSMUST00000179683 189 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm26943-201ENSMUST00000182295 957 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Gm5851-201ENSMUST00000194132 1204 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.92□□□□□ -0.5
NcanP55066 Gm44420-201ENSMUST00000203669 490 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm44917-201ENSMUST00000208798 520 ntBASIC11.92□□□□□ -0.5
NcanP55066 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC11.92□□□□□ -0.5
NcanP55066 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.92□□□□□ -0.5
NcanP55066 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Gm10020-201ENSMUST00000081993 612 ntBASIC11.92□□□□□ -0.5
NcanP55066 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.92□□□□□ -0.5
NcanP55066 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.92□□□□□ -0.5
NcanP55066 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.92□□□□□ -0.5
NcanP55066 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NcanP55066 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NcanP55066 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.91□□□□□ -0.5
NcanP55066 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NcanP55066 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.91□□□□□ -0.5
NcanP55066 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.91□□□□□ -0.5
NcanP55066 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.91□□□□□ -0.5
NcanP55066 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.91□□□□□ -0.5
NcanP55066 Gm14639-201ENSMUST00000120850 866 ntBASIC11.91□□□□□ -0.5
NcanP55066 Gm15570-201ENSMUST00000122093 625 ntBASIC11.91□□□□□ -0.5
NcanP55066 Gm14699-201ENSMUST00000122340 228 ntBASIC11.91□□□□□ -0.5
NcanP55066 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.91□□□□□ -0.5
NcanP55066 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.91□□□□□ -0.5
NcanP55066 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.91□□□□□ -0.5
NcanP55066 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.91□□□□□ -0.5
NcanP55066 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.91□□□□□ -0.5
NcanP55066 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
NcanP55066 Gm18555-201ENSMUST00000197935 584 ntBASIC11.91□□□□□ -0.5
NcanP55066 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC11.91□□□□□ -0.5
NcanP55066 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.91□□□□□ -0.5
NcanP55066 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Gm9701-201ENSMUST00000077976 427 ntBASIC11.91□□□□□ -0.5
NcanP55066 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NcanP55066 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.91□□□□□ -0.5
NcanP55066 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
NcanP55066 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NcanP55066 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NcanP55066 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NcanP55066 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NcanP55066 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
NcanP55066 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NcanP55066 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms