Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox3P53784 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox3P53784 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox3P53784 Gm23119-201ENSMUST00000158610 140 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Gm8723-201ENSMUST00000166076 820 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Gm8701-201ENSMUST00000169259 874 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Gm29499-201ENSMUST00000189151 486 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Gm28329-201ENSMUST00000191208 689 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Gm29171-201ENSMUST00000191397 486 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Gm44647-201ENSMUST00000207402 428 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Gm14005-208ENSMUST00000223654 681 ntBASIC10.9□□□□□ -0.66
Sox3P53784 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.9□□□□□ -0.66
Sox3P53784 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sox3P53784 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.9□□□□□ -0.66
Sox3P53784 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox3P53784 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox3P53784 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox3P53784 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox3P53784 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox3P53784 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.9□□□□□ -0.67
Sox3P53784 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sox3P53784 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox3P53784 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.9□□□□□ -0.67
Sox3P53784 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.9□□□□□ -0.67
Sox3P53784 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.9□□□□□ -0.67
Sox3P53784 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Sox3P53784 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.89□□□□□ -0.67
Sox3P53784 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.89□□□□□ -0.67
Sox3P53784 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox3P53784 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.89□□□□□ -0.67
Sox3P53784 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Gm8815-201ENSMUST00000173809 620 ntBASIC10.89□□□□□ -0.67
Sox3P53784 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Sox3P53784 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.89□□□□□ -0.67
Sox3P53784 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.89□□□□□ -0.67
Sox3P53784 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Gm45527-201ENSMUST00000211052 774 ntBASIC10.89□□□□□ -0.67
Sox3P53784 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.89□□□□□ -0.67
Sox3P53784 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.89□□□□□ -0.67
Sox3P53784 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sox3P53784 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms