Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube2e3P52483 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.84□□□□□ -0.67
Ube2e3P52483 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube2e3P52483 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube2e3P52483 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ube2e3P52483 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ube2e3P52483 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm11836-201ENSMUST00000121022 441 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm43378-201ENSMUST00000199336 582 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.83□□□□□ -0.68
Ube2e3P52483 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube2e3P52483 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ube2e3P52483 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube2e3P52483 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ube2e3P52483 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ube2e3P52483 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube2e3P52483 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm8111-201ENSMUST00000117659 987 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube2e3P52483 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm4654-201ENSMUST00000183305 982 ntBASIC10.82□□□□□ -0.68
Ube2e3P52483 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube2e3P52483 Gm17831-201ENSMUST00000205579 900 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms