Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.45□□□□□ -0.58
Lhx3P50481 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.45□□□□□ -0.58
Lhx3P50481 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Lhx3P50481 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.45□□□□□ -0.58
Lhx3P50481 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.45□□□□□ -0.58
Lhx3P50481 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.45□□□□□ -0.58
Lhx3P50481 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.44□□□□□ -0.58
Lhx3P50481 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lhx3P50481 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm13117-201ENSMUST00000120894 691 ntBASIC11.44□□□□□ -0.58
Lhx3P50481 Gm4917-201ENSMUST00000121452 650 ntBASIC11.44□□□□□ -0.58
Lhx3P50481 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.44□□□□□ -0.58
Lhx3P50481 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.44□□□□□ -0.58
Lhx3P50481 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.44□□□□□ -0.58
Lhx3P50481 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lhx3P50481 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Lhx3P50481 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lhx3P50481 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lhx3P50481 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lhx3P50481 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.43□□□□□ -0.58
Lhx3P50481 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm5100-201ENSMUST00000195631 589 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.43□□□□□ -0.58
Lhx3P50481 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Lhx3P50481 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lhx3P50481 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm10020-201ENSMUST00000081993 612 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lhx3P50481 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.43□□□□□ -0.58
Lhx3P50481 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lhx3P50481 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.43□□□□□ -0.58
Lhx3P50481 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms