Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm14193-201ENSMUST00000105067 153 ntBASIC10.97□□□□□ -0.65
Hnf4aP49698 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm15595-201ENSMUST00000120840 961 ntBASIC10.97□□□□□ -0.65
Hnf4aP49698 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm22846-201ENSMUST00000157706 270 ntBASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm44506-201ENSMUST00000206278 965 ntBASIC10.97□□□□□ -0.65
Hnf4aP49698 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Hnf4aP49698 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hnf4aP49698 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hnf4aP49698 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm24844-201ENSMUST00000158679 127 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm19208-201ENSMUST00000213861 912 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.96□□□□□ -0.65
Hnf4aP49698 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hnf4aP49698 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hnf4aP49698 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hnf4aP49698 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hnf4aP49698 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Hnf4aP49698 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.96□□□□□ -0.66
Hnf4aP49698 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.96□□□□□ -0.66
Hnf4aP49698 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.96□□□□□ -0.66
Hnf4aP49698 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hnf4aP49698 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hnf4aP49698 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.95□□□□□ -0.66
Hnf4aP49698 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Hnf4aP49698 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hnf4aP49698 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Hnf4aP49698 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.95□□□□□ -0.66
Hnf4aP49698 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hnf4aP49698 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms