Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
GdnfP48540 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Gm37965-201ENSMUST00000195304 1362 ntBASIC10□□□□□ -0.81
GdnfP48540 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
GdnfP48540 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
GdnfP48540 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
GdnfP48540 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
GdnfP48540 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
GdnfP48540 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Gm15610-201ENSMUST00000120584 195 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm25668-201ENSMUST00000157700 129 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Gm32999-201ENSMUST00000192693 562 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Gm38018-201ENSMUST00000195651 540 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm44262-201ENSMUST00000204969 372 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm44683-201ENSMUST00000209088 484 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.99□□□□□ -0.81
GdnfP48540 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
GdnfP48540 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.99□□□□□ -0.81
GdnfP48540 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
GdnfP48540 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.99□□□□□ -0.81
GdnfP48540 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
GdnfP48540 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
GdnfP48540 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
GdnfP48540 Gm13296-201ENSMUST00000117854 997 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm5419-201ENSMUST00000119301 527 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.98□□□□□ -0.81
GdnfP48540 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Gm37604-201ENSMUST00000191749 1272 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm38241-201ENSMUST00000192641 898 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm6439-201ENSMUST00000199849 862 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms