Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sox2P48432 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Sox2P48432 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sox2P48432 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm12241-201ENSMUST00000118330 726 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Gm7150-201ENSMUST00000122032 981 ntBASIC10.56□□□□□ -0.72
Sox2P48432 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.56□□□□□ -0.72
Sox2P48432 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Sox2P48432 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm6334-201ENSMUST00000207083 228 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Gm44651-201ENSMUST00000207343 372 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Gm45113-201ENSMUST00000207518 165 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.56□□□□□ -0.72
Sox2P48432 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.56□□□□□ -0.72
Sox2P48432 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sox2P48432 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sox2P48432 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.56□□□□□ -0.72
Sox2P48432 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox2P48432 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox2P48432 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.55□□□□□ -0.72
Sox2P48432 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.55□□□□□ -0.72
Sox2P48432 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.55□□□□□ -0.72
Sox2P48432 Gm27501-201ENSMUST00000183599 107 ntBASIC10.55□□□□□ -0.72
Sox2P48432 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.55□□□□□ -0.72
Sox2P48432 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox2P48432 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox2P48432 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.55□□□□□ -0.72
Sox2P48432 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.55□□□□□ -0.72
Sox2P48432 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.55□□□□□ -0.72
Sox2P48432 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sox2P48432 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox2P48432 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms