Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Fen1P39749 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.38□□□□□ -0.59
Fen1P39749 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.38□□□□□ -0.59
Fen1P39749 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Fen1P39749 Gm23270-201ENSMUST00000104055 131 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm11222-201ENSMUST00000119005 738 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.38□□□□□ -0.59
Fen1P39749 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm37466-201ENSMUST00000195692 652 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.38□□□□□ -0.59
Fen1P39749 Gm21769-201ENSMUST00000211922 111 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Gm18065-201ENSMUST00000221395 526 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm5455-201ENSMUST00000058710 715 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Fen1P39749 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Fen1P39749 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.38□□□□□ -0.59
Fen1P39749 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.37□□□□□ -0.59
Fen1P39749 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Fen1P39749 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Fen1P39749 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.37□□□□□ -0.59
Fen1P39749 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Fen1P39749 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.37□□□□□ -0.59
Fen1P39749 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fen1P39749 Gm6963-201ENSMUST00000147879 379 ntBASIC11.37□□□□□ -0.59
Fen1P39749 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm18827-201ENSMUST00000188341 790 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Gm37259-201ENSMUST00000193903 849 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Gm19187-201ENSMUST00000206781 892 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fen1P39749 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fen1P39749 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.37□□□□□ -0.59
Fen1P39749 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.37□□□□□ -0.59
Fen1P39749 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fen1P39749 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.36□□□□□ -0.59
Fen1P39749 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.36□□□□□ -0.59
Fen1P39749 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.36□□□□□ -0.59
Fen1P39749 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fen1P39749 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.36□□□□□ -0.59
Fen1P39749 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms