Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Slc6a1P31648 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Slc6a1P31648 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm15547-201ENSMUST00000122152 333 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm15276-201ENSMUST00000145953 498 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.73□□□□□ -0.85
Slc6a1P31648 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Slc6a1P31648 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Slc6a1P31648 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm13665-201ENSMUST00000120830 528 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.72□□□□□ -0.85
Slc6a1P31648 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm16570-201ENSMUST00000161951 436 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm3096-201ENSMUST00000185770 364 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm37201-201ENSMUST00000191845 523 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 Gm32111-201ENSMUST00000207689 846 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.72□□□□□ -0.85
Slc6a1P31648 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Slc6a1P31648 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.72□□□□□ -0.85
Slc6a1P31648 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms