Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cbx3P23198 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cbx3P23198 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cbx3P23198 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cbx3P23198 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Cbx3P23198 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm12036-201ENSMUST00000120008 530 ntBASIC10.28□□□□□ -0.76
Cbx3P23198 Gm12490-201ENSMUST00000120255 560 ntBASIC10.28□□□□□ -0.76
Cbx3P23198 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm27331-201ENSMUST00000183705 60 ntBASIC10.28□□□□□ -0.76
Cbx3P23198 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.28□□□□□ -0.76
Cbx3P23198 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm10012-201ENSMUST00000078252 192 ntBASIC10.28□□□□□ -0.76
Cbx3P23198 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cbx3P23198 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.28□□□□□ -0.76
Cbx3P23198 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.28□□□□□ -0.76
Cbx3P23198 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cbx3P23198 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cbx3P23198 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cbx3P23198 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cbx3P23198 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.27□□□□□ -0.76
Cbx3P23198 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cbx3P23198 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC10.27□□□□□ -0.76
Cbx3P23198 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Cbx3P23198 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.27□□□□□ -0.77
Cbx3P23198 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cbx3P23198 Gm9022-201ENSMUST00000182482 992 ntBASIC10.27□□□□□ -0.77
Cbx3P23198 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.27□□□□□ -0.77
Cbx3P23198 Gm6439-201ENSMUST00000199849 862 ntBASIC10.27□□□□□ -0.77
Cbx3P23198 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.27□□□□□ -0.77
Cbx3P23198 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Gm10254-201ENSMUST00000052888 867 ntBASIC10.27□□□□□ -0.77
Cbx3P23198 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.27□□□□□ -0.77
Cbx3P23198 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cbx3P23198 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.26□□□□□ -0.77
Cbx3P23198 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cbx3P23198 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms