Protein–RNA interactions for Protein: P15409

Rho, Rhodopsin, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RhoP15409 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
RhoP15409 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.43□□□□□ -0.58
RhoP15409 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Gm15620-201ENSMUST00000122949 270 ntBASIC11.43□□□□□ -0.58
RhoP15409 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.43□□□□□ -0.58
RhoP15409 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Gm17221-201ENSMUST00000163909 481 ntBASIC11.43□□□□□ -0.58
RhoP15409 Gm17073-201ENSMUST00000168069 556 ntBASIC11.43□□□□□ -0.58
RhoP15409 Mir6923-201ENSMUST00000184592 72 ntBASIC11.43□□□□□ -0.58
RhoP15409 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.43□□□□□ -0.58
RhoP15409 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.43□□□□□ -0.58
RhoP15409 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.43□□□□□ -0.58
RhoP15409 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.43□□□□□ -0.58
RhoP15409 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RhoP15409 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.43□□□□□ -0.58
RhoP15409 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RhoP15409 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RhoP15409 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
RhoP15409 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RhoP15409 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.42□□□□□ -0.58
RhoP15409 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
RhoP15409 Snord17-201ENSMUST00000104526 238 ntBASIC11.42□□□□□ -0.58
RhoP15409 Gm14274-201ENSMUST00000117182 615 ntBASIC11.42□□□□□ -0.58
RhoP15409 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.42□□□□□ -0.58
RhoP15409 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.42□□□□□ -0.58
RhoP15409 Gm12453-201ENSMUST00000121981 331 ntBASIC11.42□□□□□ -0.58
RhoP15409 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.42□□□□□ -0.58
RhoP15409 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.42□□□□□ -0.58
RhoP15409 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.42□□□□□ -0.58
RhoP15409 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gm20414-201ENSMUST00000172918 646 ntBASIC11.42□□□□□ -0.58
RhoP15409 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Mir6941-201ENSMUST00000184711 59 ntBASIC11.42□□□□□ -0.58
RhoP15409 Gm7902-201ENSMUST00000198842 947 ntBASIC11.42□□□□□ -0.58
RhoP15409 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.42□□□□□ -0.58
RhoP15409 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.42□□□□□ -0.58
RhoP15409 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.42□□□□□ -0.58
RhoP15409 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RhoP15409 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.41□□□□□ -0.58
RhoP15409 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RhoP15409 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RhoP15409 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.41□□□□□ -0.58
RhoP15409 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RhoP15409 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.41□□□□□ -0.58
RhoP15409 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.41□□□□□ -0.58
RhoP15409 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RhoP15409 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RhoP15409 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms