Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
P06344 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
P06344 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.1□□□□□ -0.79
P06344 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.1□□□□□ -0.79
P06344 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.1□□□□□ -0.79
P06344 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
P06344 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
P06344 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.1□□□□□ -0.79
P06344 Gm12516-201ENSMUST00000120819 385 ntBASIC10.1□□□□□ -0.79
P06344 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.1□□□□□ -0.79
P06344 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.1□□□□□ -0.79
P06344 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.1□□□□□ -0.79
P06344 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.1□□□□□ -0.79
P06344 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 Gm10254-201ENSMUST00000052888 867 ntBASIC10.1□□□□□ -0.79
P06344 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
P06344 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
P06344 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
P06344 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.1□□□□□ -0.79
P06344 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06344 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.09□□□□□ -0.79
P06344 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.09□□□□□ -0.79
P06344 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.09□□□□□ -0.79
P06344 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.09□□□□□ -0.79
P06344 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.09□□□□□ -0.79
P06344 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
P06344 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06344 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P06344 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.09□□□□□ -0.79
P06344 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.09□□□□□ -0.79
P06344 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.09□□□□□ -0.79
P06344 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.09□□□□□ -0.79
P06344 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Gm25492-201ENSMUST00000157383 129 ntBASIC10.09□□□□□ -0.79
P06344 Gm3329-201ENSMUST00000159873 556 ntBASIC10.09□□□□□ -0.79
P06344 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06344 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.09□□□□□ -0.79
P06344 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.09□□□□□ -0.79
P06344 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.09□□□□□ -0.79
P06344 Mir7032-201ENSMUST00000185154 79 ntBASIC10.09□□□□□ -0.79
P06344 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.09□□□□□ -0.79
P06344 Gm42657-201ENSMUST00000201746 211 ntBASIC10.09□□□□□ -0.79
P06344 Gm43966-201ENSMUST00000203301 612 ntBASIC10.09□□□□□ -0.79
P06344 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P06344 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.09□□□□□ -0.79
P06344 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06344 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 321.7 ms