Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.38□□□□□ -0.75
P01852 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.38□□□□□ -0.75
P01852 Lect2-202ENSMUST00000225183 823 ntBASIC10.38□□□□□ -0.75
P01852 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
P01852 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
P01852 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
P01852 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.38□□□□□ -0.75
P01852 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.38□□□□□ -0.75
P01852 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.38□□□□□ -0.75
P01852 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.38□□□□□ -0.75
P01852 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
P01852 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P01852 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P01852 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.38□□□□□ -0.75
P01852 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
P01852 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P01852 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
P01852 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P01852 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.37□□□□□ -0.75
P01852 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.37□□□□□ -0.75
P01852 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
P01852 Gm11246-201ENSMUST00000120880 345 ntBASIC10.37□□□□□ -0.75
P01852 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.37□□□□□ -0.75
P01852 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.37□□□□□ -0.75
P01852 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.37□□□□□ -0.75
P01852 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.37□□□□□ -0.75
P01852 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P01852 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.37□□□□□ -0.75
P01852 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gm7467-201ENSMUST00000185173 652 ntBASIC10.37□□□□□ -0.75
P01852 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.37□□□□□ -0.75
P01852 Gm43966-201ENSMUST00000203301 612 ntBASIC10.37□□□□□ -0.75
P01852 Gm44008-201ENSMUST00000204345 412 ntBASIC10.37□□□□□ -0.75
P01852 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.37□□□□□ -0.75
P01852 Gm5996-201ENSMUST00000211110 718 ntBASIC10.37□□□□□ -0.75
P01852 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.37□□□□□ -0.75
P01852 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.37□□□□□ -0.75
P01852 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.37□□□□□ -0.75
P01852 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
P01852 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
P01852 Gm5451-201ENSMUST00000080545 579 ntBASIC10.37□□□□□ -0.75
P01852 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
P01852 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.37□□□□□ -0.75
P01852 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
P01852 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
P01852 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P01852 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.37□□□□□ -0.75
P01852 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.37□□□□□ -0.75
P01852 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P01852 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.37□□□□□ -0.75
P01852 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01852 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms