Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Mir1247-201ENSMUST00000116706 82 ntBASIC8.24□□□□□ -1.09
TcraP01849 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm11425-201ENSMUST00000119608 498 ntBASIC8.24□□□□□ -1.09
TcraP01849 Gm14660-201ENSMUST00000119809 575 ntBASIC8.24□□□□□ -1.09
TcraP01849 Trav4d-2-201ENSMUST00000120914 335 ntBASIC8.24□□□□□ -1.09
TcraP01849 Gm11960-201ENSMUST00000122068 925 ntBASIC8.24□□□□□ -1.09
TcraP01849 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
TcraP01849 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC8.24□□□□□ -1.09
TcraP01849 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC8.24□□□□□ -1.09
TcraP01849 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC8.24□□□□□ -1.09
TcraP01849 Gm6222-202ENSMUST00000182143 629 ntBASIC8.24□□□□□ -1.09
TcraP01849 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm38314-201ENSMUST00000195709 625 ntBASIC8.24□□□□□ -1.09
TcraP01849 Gm37008-201ENSMUST00000195712 319 ntBASIC8.24□□□□□ -1.09
TcraP01849 Gm43433-201ENSMUST00000196573 481 ntBASIC8.24□□□□□ -1.09
TcraP01849 Gm42937-201ENSMUST00000197360 752 ntBASIC8.24□□□□□ -1.09
TcraP01849 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC8.24□□□□□ -1.09
TcraP01849 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.24□□□□□ -1.09
TcraP01849 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
TcraP01849 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm9396-201ENSMUST00000076703 567 ntBASIC8.24□□□□□ -1.09
TcraP01849 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.24□□□□□ -1.09
TcraP01849 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm37348-201ENSMUST00000193104 1789 ntBASIC8.24□□□□□ -1.09
TcraP01849 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Gm45041-201ENSMUST00000207366 3108 ntBASIC8.24□□□□□ -1.09
TcraP01849 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 AC115891.3-201ENSMUST00000219161 2472 ntBASIC8.24□□□□□ -1.09
TcraP01849 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC8.24□□□□□ -1.09
TcraP01849 Dctn4-202ENSMUST00000223590 1530 ntBASIC8.24□□□□□ -1.09
TcraP01849 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TcraP01849 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.23□□□□□ -1.09
TcraP01849 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 Gm7841-201ENSMUST00000122108 1629 ntBASIC8.23□□□□□ -1.09
TcraP01849 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Gm13829-201ENSMUST00000119600 138 ntBASIC8.23□□□□□ -1.09
TcraP01849 Gm13342-201ENSMUST00000121055 207 ntBASIC8.23□□□□□ -1.09
TcraP01849 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC8.23□□□□□ -1.09
TcraP01849 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Gm24548-201ENSMUST00000158650 108 ntBASIC8.23□□□□□ -1.09
TcraP01849 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC8.23□□□□□ -1.09
TcraP01849 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.23□□□□□ -1.09
TcraP01849 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TcraP01849 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.23□□□□□ -1.09
TcraP01849 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms