Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.46□□□□□ -0.41
Trdmt1O55055 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm43002-201ENSMUST00000200310 155 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Gm5449-201ENSMUST00000081132 357 ntBASIC12.46□□□□□ -0.41
Trdmt1O55055 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.46□□□□□ -0.41
Trdmt1O55055 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trdmt1O55055 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trdmt1O55055 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trdmt1O55055 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.46□□□□□ -0.42
Trdmt1O55055 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.46□□□□□ -0.42
Trdmt1O55055 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.46□□□□□ -0.42
Trdmt1O55055 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.46□□□□□ -0.42
Trdmt1O55055 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trdmt1O55055 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Trdmt1O55055 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm11475-201ENSMUST00000118482 476 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm9791-201ENSMUST00000060997 447 ntBASIC12.45□□□□□ -0.42
Trdmt1O55055 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trdmt1O55055 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trdmt1O55055 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trdmt1O55055 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms