Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm17944-201ENSMUST00000186351 643 ntBASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm17936-201ENSMUST00000199413 988 ntBASIC11.44□□□□□ -0.58
Col4a6B1AVK5 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.44□□□□□ -0.58
Col4a6B1AVK5 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm13192-201ENSMUST00000101199 208 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Mir291b-201ENSMUST00000104838 79 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm12463-201ENSMUST00000118271 849 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm10443-201ENSMUST00000119024 210 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm13857-201ENSMUST00000139645 173 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm29543-201ENSMUST00000188138 967 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm20568-201ENSMUST00000197129 208 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm8796-201ENSMUST00000219122 936 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm3791-201ENSMUST00000220790 768 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm6304-201ENSMUST00000096579 447 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm4775-201ENSMUST00000169588 402 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm6686-201ENSMUST00000178455 258 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm27833-201ENSMUST00000184285 124 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm8557-201ENSMUST00000220777 475 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Gm29689-201ENSMUST00000221076 589 ntBASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col4a6B1AVK5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms