Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm3150-201ENSMUST00000166418 204 ntBASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm10807-201ENSMUST00000177134 795 ntBASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm19208-201ENSMUST00000213861 912 ntBASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Gm42706-201ENSMUST00000199733 1910 ntBASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav9n-2A0A0G2JDP3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm5996-201ENSMUST00000211110 718 ntBASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav9n-2A0A0G2JDP3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms