Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cldn9Q9Z0S7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm4294-201ENSMUST00000105169 614 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm22711-201ENSMUST00000116890 133 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm11244-201ENSMUST00000121243 237 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm10774-201ENSMUST00000188689 204 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm8574-201ENSMUST00000203207 924 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm17825-201ENSMUST00000206836 794 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm2517-201ENSMUST00000215651 348 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cldn9Q9Z0S7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm25148-201ENSMUST00000104611 123 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm9089-201ENSMUST00000122027 526 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm7666-201ENSMUST00000146631 819 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ginm1-202ENSMUST00000065124 300 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms