Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gm8385-201ENSMUST00000058999 643 ntBASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Btrc-209ENSMUST00000224478 2194 ntBASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.14□□□□□ -0.95
Ccl28Q9JIL2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm8815-201ENSMUST00000173809 620 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm38151-201ENSMUST00000195085 289 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm4978-201ENSMUST00000071565 801 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl28Q9JIL2 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Mir877-201ENSMUST00000104738 85 ntBASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.12□□□□□ -0.95
Ccl28Q9JIL2 Gm7150-201ENSMUST00000122032 981 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms