Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37666-201ENSMUST00000194110 866 ntBASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Gm18065-201ENSMUST00000221395 526 ntBASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Lima1Q9ERG0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm14130-201ENSMUST00000118417 987 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm8343-201ENSMUST00000182705 994 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Gm17827-201ENSMUST00000211825 742 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lima1Q9ERG0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm27627-201ENSMUST00000183644 150 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm29615-201ENSMUST00000185371 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm28224-201ENSMUST00000186078 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm29001-201ENSMUST00000186177 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm28292-201ENSMUST00000186593 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm28101-201ENSMUST00000187608 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm29076-201ENSMUST00000187689 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm28302-201ENSMUST00000187931 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm28646-201ENSMUST00000188220 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm28205-201ENSMUST00000189177 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm29032-201ENSMUST00000189797 697 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms