Protein–RNA interactions for Protein: Q9D4U4

H2al3, H2A histone family member L3, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al3Q9D4U4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm13916-201ENSMUST00000117368 628 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm12579-201ENSMUST00000118040 783 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm7150-201ENSMUST00000122032 981 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm27341-201ENSMUST00000183570 106 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm28450-201ENSMUST00000187349 638 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm44008-201ENSMUST00000204345 412 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Gm21811-201ENSMUST00000096485 930 ntBASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
H2al3Q9D4U4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm8199-201ENSMUST00000121323 823 ntBASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm8459-201ENSMUST00000162504 760 ntBASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm27552-201ENSMUST00000183351 62 ntBASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm27844-201ENSMUST00000183613 62 ntBASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm5733-201ENSMUST00000190232 939 ntBASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
H2al3Q9D4U4 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms