Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Stag1Q9D3E6 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Gm9369-201ENSMUST00000196009 733 ntBASIC13.52□□□□□ -0.25
Stag1Q9D3E6 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Gm43966-201ENSMUST00000203301 612 ntBASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Gm43912-201ENSMUST00000204352 538 ntBASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.52□□□□□ -0.25
Stag1Q9D3E6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Stag1Q9D3E6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm15617-201ENSMUST00000118973 771 ntBASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm13284-201ENSMUST00000121020 547 ntBASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Mir1905-201ENSMUST00000122779 82 ntBASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Stag1Q9D3E6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm24791-201ENSMUST00000104284 131 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm9133-201ENSMUST00000118289 540 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm14497-201ENSMUST00000119537 580 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm19246-201ENSMUST00000173599 255 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm26989-201ENSMUST00000182608 749 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms