Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm12036-201ENSMUST00000120008 530 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm43184-201ENSMUST00000197247 542 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 AU022133-201ENSMUST00000200601 873 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm4157-201ENSMUST00000211647 679 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpusd4Q9CWX4 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gm12217-201ENSMUST00000118858 696 ntBASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gm11660-201ENSMUST00000120955 412 ntBASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Gm5705-201ENSMUST00000066241 711 ntBASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpusd4Q9CWX4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.65□□□□□ -0.87
Rpusd4Q9CWX4 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpusd4Q9CWX4 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.65□□□□□ -0.87
Rpusd4Q9CWX4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpusd4Q9CWX4 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.65□□□□□ -0.87
Rpusd4Q9CWX4 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Rpusd4Q9CWX4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpusd4Q9CWX4 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpusd4Q9CWX4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms