Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm23251-201ENSMUST00000103773 110 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm11941-201ENSMUST00000119904 610 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm15595-201ENSMUST00000120840 961 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm3150-201ENSMUST00000166418 204 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.89□□□□□ -0.67
Khdc3Q9CWU5 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm4909-201ENSMUST00000118749 794 ntBASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Khdc3Q9CWU5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms