Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm14270-201ENSMUST00000118388 846 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm15197-201ENSMUST00000120526 478 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm16397-201ENSMUST00000122201 494 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm29067-201ENSMUST00000190821 470 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm37028-201ENSMUST00000194276 107 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm43380-201ENSMUST00000200421 220 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm7Q9CQQ8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm25148-201ENSMUST00000104611 123 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm29410-201ENSMUST00000188383 694 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm3793-201ENSMUST00000204973 672 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm10020-201ENSMUST00000081993 612 ntBASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lsm7Q9CQQ8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm7Q9CQQ8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms