Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Smim3Q99PE5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Smim3Q99PE5 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm27437-201ENSMUST00000183429 107 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm7561-201ENSMUST00000211203 886 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.58□□□□□ -0.88
Smim3Q99PE5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.58□□□□□ -0.88
Smim3Q99PE5 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm13316-201ENSMUST00000140537 691 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm24548-201ENSMUST00000158650 108 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm5370-201ENSMUST00000187187 574 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.57□□□□□ -0.88
Smim3Q99PE5 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Smim3Q99PE5 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms