Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm6170-201ENSMUST00000187672 1388 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Clp1Q99LI9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Cog3-203ENSMUST00000227473 4197 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.99□□□□□ -0.49
Clp1Q99LI9 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gm6331-201ENSMUST00000217890 450 ntBASIC11.99□□□□□ -0.49
Clp1Q99LI9 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gm10020-201ENSMUST00000081993 612 ntBASIC11.99□□□□□ -0.49
Clp1Q99LI9 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.99□□□□□ -0.49
Clp1Q99LI9 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Clp1Q99LI9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clp1Q99LI9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Mir181d-201ENSMUST00000102383 72 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 456.3 ms