Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm9089-201ENSMUST00000122027 526 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm21092-201ENSMUST00000178995 955 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm3786-201ENSMUST00000202659 378 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm45118-201ENSMUST00000208928 825 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdha3Q91Y16 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm7741-201ENSMUST00000181445 989 ntBASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm4654-201ENSMUST00000183305 982 ntBASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms