Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.72□□□□□ -0.53
Trim60Q8VI40 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trim60Q8VI40 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.71□□□□□ -0.53
Trim60Q8VI40 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.71□□□□□ -0.53
Trim60Q8VI40 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm7584-201ENSMUST00000175829 940 ntBASIC11.71□□□□□ -0.53
Trim60Q8VI40 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm8100-201ENSMUST00000182906 988 ntBASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Gm10288-201ENSMUST00000084614 537 ntBASIC11.71□□□□□ -0.53
Trim60Q8VI40 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim60Q8VI40 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim60Q8VI40 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim60Q8VI40 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim60Q8VI40 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.7□□□□□ -0.54
Trim60Q8VI40 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms