Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm5419-201ENSMUST00000119301 527 ntBASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm27046-201ENSMUST00000182160 463 ntBASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm42608-201ENSMUST00000197563 2018 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm15198-201ENSMUST00000117283 177 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm27516-201ENSMUST00000184237 98 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm18893-201ENSMUST00000198416 943 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm6334-201ENSMUST00000207083 228 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm21769-201ENSMUST00000211922 111 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Gm42741-201ENSMUST00000201340 2278 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh18Q8VHR0 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh18Q8VHR0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms