Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.71□□□□□ -0.53
Rprd1aQ8VDS4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rprd1aQ8VDS4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm13888-201ENSMUST00000119148 422 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm14460-201ENSMUST00000121511 639 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm45550-201ENSMUST00000209380 946 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rprd1aQ8VDS4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rprd1aQ8VDS4 Gm4294-201ENSMUST00000105169 614 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms