Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.17□□□□□ -0.3
Rtn1Q8K0T0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rtn1Q8K0T0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm8737-201ENSMUST00000122208 642 ntBASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm44548-201ENSMUST00000208929 192 ntBASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rtn1Q8K0T0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm8111-201ENSMUST00000117659 987 ntBASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm15615-201ENSMUST00000118876 198 ntBASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm21092-201ENSMUST00000178995 955 ntBASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm19212-201ENSMUST00000216642 862 ntBASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rtn1Q8K0T0 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.15□□□□□ -0.31
Rtn1Q8K0T0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gm9211-201ENSMUST00000182882 975 ntBASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Ighv10-4-201ENSMUST00000193702 299 ntBASIC13.14□□□□□ -0.31
Rtn1Q8K0T0 Gm44315-201ENSMUST00000203041 219 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms