Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco1Q8CEZ1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Smco1Q8CEZ1 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco1Q8CEZ1 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco1Q8CEZ1 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Smco1Q8CEZ1 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Smco1Q8CEZ1 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm11989-201ENSMUST00000117240 672 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm11511-201ENSMUST00000118146 540 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm11362-201ENSMUST00000118838 850 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm28937-201ENSMUST00000185413 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm29400-201ENSMUST00000187208 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm28662-201ENSMUST00000188446 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm28251-201ENSMUST00000188835 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm37318-201ENSMUST00000194325 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm38017-201ENSMUST00000194768 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm37287-201ENSMUST00000195449 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm37793-201ENSMUST00000195548 695 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm5982-201ENSMUST00000196234 512 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm44008-201ENSMUST00000204345 412 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.27□□□□□ -0.77
Smco1Q8CEZ1 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm15004-201ENSMUST00000119192 630 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm27437-201ENSMUST00000183429 107 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Mir6977-201ENSMUST00000184960 64 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm8515-201ENSMUST00000194852 576 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm37301-201ENSMUST00000195412 568 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Rps4l-202ENSMUST00000204242 789 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smco1Q8CEZ1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms