Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm28686-201ENSMUST00000187404 609 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm45113-201ENSMUST00000207518 165 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm4978-201ENSMUST00000071565 801 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam228aQ8CDW1 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm12957-201ENSMUST00000117835 377 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm17420-201ENSMUST00000164753 153 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm5616-201ENSMUST00000165252 384 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm8741-201ENSMUST00000174736 384 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm9353-201ENSMUST00000200472 604 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fam228aQ8CDW1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Gm11573-201ENSMUST00000119956 394 ntBASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam228aQ8CDW1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms